No problemo.
I hate to see someone spend time and money on a project, only to have the paint fail within a month because the putty fumes "popped through". I don't know about you folks, but I'd rather spend an extra couple days in the prep stages than have to redo it later because I was impatient.
As an amendment, undercoat the fender before ANY topside work is done. That way, if you get any up top, you can use some lacquer thinnner on a rag to wipe off the excess. With no harm done. Beats messing up the bondo/related, or the primer with the thinner. No sense sanding if you don't have too...
-WD
Oh, and wear a dust mask when you sand the putty. Catalyzed materials are like asbestos, they go in easy and don't come out...