Well I got fresh oil and filter (rotella), Raptor petcock and a cleaned carb.

It runs better but still not good. I rode it around the block ant it was hiccuping and backfiring quite a bit even all warmed up.

I have the airbox out, so no filter, just the rubber air intake attached to the carb. The jets are stock size I am sure. I removed the idle mixture plug and the screw was all the way in. I backed it out a few turns till the bike idled higher and that helped a lot. I will be putting a uni filter on the rubber air intake so the engine intake breathing will be apparently more open than stock. I have a hard time believing that the stock is so restrictive that it would run so poorly with it removed.

Tomorrow I will remove the carb again and shim the needle as prescribed
by many here and see what that does.

Without a filter the bike runs really bad,it is jetted lean  from the factory and removing the filter makes it much worse.a cone filter won't be much better you'll have to rejet the carb .

Well I got it running better today.
Pulled the carb and took out the white spacer from the top of the needle and ground it down about half. Put it all back together and I could barely get it to run at all. Pulled the carb again and checked the float bowl and it was still clean, but I noticed when I blew it all out with air there was liquid that would keep coming from one of the brass floats near to where it was soldered onto the bracket.
So I cleaned, sanded, wire brushed the float where the leak was and tried to get all the gas out of it and then attempted to solder where it was leaking.
After soldering I dipped it in a bowl of water and saw no air bubbles, so maybe fixed, time will tell.
Adjusted the float level to just slightly over an inch and popped it all back together and onto the bike.
Checked the fuel/float level with a clear hose attached to the bottom of the bowl and unscrewed the drain screw. Fuel level looks like it is right at the gasket level. When I re-jet I will probably lower the fuel level a bit more.

So it runs decently now but not great, but I will hold off re-jetting till I get it registered and my filter comes in and maybe until I can find a harley muffler.

I got other stuff to do on it like replace the 12 year old tires that look great, no cracking or anything as the bike was stored inside.
It also has the infamous bit of seeping of oil on the left of the engine where the head joins the block. I will probably get the aluminum plug for the fix but I will see how bad it is first.